Heatmap: Cluster_217 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000849.7 (tig00000849_g4747.t1)
-0.84 -0.21 -0.18 0.01 0.41 0.63 0.32 0.21 0.01 -0.04 -0.1 -0.44 -0.74 -0.89 -1.53 -1.21 -0.26 0.57 0.52 -0.29 -1.03 0.34 -0.01 1.18 0.63 -0.49
Cpa|evm.model.tig00000889.22 (tig00000889_g5311.t1)
-0.36 -0.78 -0.26 -0.44 -0.01 -0.02 -0.41 -0.54 -1.69 -2.15 -1.66 -0.51 -0.67 -0.89 0.19 -1.73 -0.65 0.78 0.15 -1.6 -1.18 1.42 -0.79 2.11 1.29 0.28
0.16 0.67 -0.2 0.38 -0.86 -0.88 -0.03 0.16 0.4 -0.09 0.19 0.66 -0.12 -0.28 -1.36 -1.09 -1.65 -0.37 -1.22 -1.55 -4.17 0.57 0.0 1.38 1.45 -0.78
Cpa|evm.model.tig00021254.56 (tig00021254_g19735.t1)
-0.4 0.68 -0.01 -0.22 0.29 -1.14 -0.05 -0.05 -0.89 -0.03 -0.75 -0.28 -0.47 -0.9 -0.16 0.32 -0.7 -0.01 0.17 0.05 - 0.75 -0.44 1.08 1.53 -0.68
Cpa|evm.model.tig00021351.16 (tig00021351_g20671.t1)
-0.33 -0.89 -0.9 -0.35 0.36 0.2 0.11 0.51 -0.02 -0.23 -0.5 -0.55 -0.42 -1.53 -0.29 -0.62 -0.86 0.59 -1.46 -0.77 -0.91 0.71 -1.65 1.4 1.9 -0.4
Cpa|evm.model.tig00021494.22 (tig00021590_g22781.t1)
-1.29 -1.18 -0.34 -0.19 0.55 0.05 0.08 -0.0 -0.45 -1.33 -0.7 -1.15 -0.17 -1.93 -0.2 -0.81 -2.1 0.88 -2.0 -0.45 -0.58 1.15 -1.12 1.47 2.12 -0.65

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.