1. Home
  2. Tools
  3. Expression Heatmap
  4. Results

Heatmap: Cluster_247 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

 Transpose table  Download table
Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00000113.103 (tig00000912_g5417.t1)
 - - 1.88 - - - - - - 1.84 - - - - - 2.03 - 1.14 2.68 - - - - 1.78 - 1.38
Cpa|evm.model.tig00000889.28 (tig00020936_g16183.t1)
 -0.57 0.22 -0.5 -0.43 -0.22 1.07 -1.5 0.96 0.09 - 0.44 -1.4 - 0.9 -0.06 2.3 - -0.92 1.35 -1.83 -1.49 - - 0.98 - 0.27

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.