Heatmap: Cluster_2 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Glc+ (10 mM),0.5h
Glc+ (10 mM),1h
Glc+ (10 mM),3h
Glc+ (10 mM),6h
Glc+ (10 mM),12h
Glc+ (20 mM),0h
Glc+ (20 mM),0.5h
Glc+ (20 mM),1h
Glc+ (20 mM),3h
Glc+ (20 mM),6h
Glc+ (20 mM),12h
Glc-,0h
Glc-,0.5h
Glc-,1h
Glc-,3h
Glc-,6h
Glc-,12h
Heterotrophy,Mixotrophy
High light,0.5h
High light,1h
High light,3h
High light,6h
High light,12h
High light,Proteose
Low light,Proteose
Med light,0h
Med light,0.5h
Med light,1h
Med light,3h
Med light,6h
Med light,12h
Med light,Proteose
Med light,Proteose,-Fe
Med light,Proteose,-N
Med light,Proteose,-P
Med light,Proteose,-S
Med light,Proteose,Glc+
Med light,Proteose,H2O2
Med light,Proteose,Rose Bengal
Single cell
No light,Proteose
Whole cell,Autotrophy,ND+cerulenin,6h
Whole cell,Autotrophy,ND+cerulenin,12h
Whole cell,Autotrophy,ND,0h
Whole cell,Autotrophy,ND,3h
Whole cell,Autotrophy,ND,6h
Whole cell,Autotrophy,ND,12h
Whole cell,Autotrophy,ND,24h
- - 0.36 -0.65 - 2.14 4.16 1.37 1.5 0.63 0.99 - 0.83 0.7 0.16 -1.32 -1.14 -2.45 - - - 2.18 -0.91 -0.81 - - -1.57 -1.77 -1.76 - -2.97 - - -0.24 - - - -1.12 - -1.29 - - -0.33 - - -3.26 - -
- -1.64 -1.33 - -1.74 0.94 3.7 0.34 1.4 0.98 -0.45 - -1.15 -0.47 -0.72 -1.87 -0.57 -0.92 -1.11 -0.71 - 2.32 -1.28 2.64 0.53 - - -1.68 - -0.75 -0.7 1.35 - - - - - - - -0.13 0.94 - -1.57 - -0.88 - -2.04 -
0.13 - 0.61 - - -0.21 3.65 - 0.02 0.15 1.24 - - - -1.13 - - - - - - 2.26 - 1.99 1.47 - - - - - - 0.97 - - 1.96 3.13 - - - - - - - - -0.25 - - -
- - - - - - - - - - - 3.91 - - - - - 1.0 - - - 3.99 - - - 3.91 - - - - - - - - - - - - - - - - - - - - - -
-1.35 -1.89 -0.07 -0.62 -0.93 1.37 2.77 0.99 1.33 0.42 0.48 -0.88 0.26 0.11 0.22 -1.37 -0.82 -0.49 -0.98 -0.86 -0.05 1.0 -0.53 0.56 -0.02 -0.95 -0.8 -0.52 -1.38 0.46 -2.03 -1.0 -2.7 -0.12 -1.75 -1.36 -0.86 -1.51 -4.24 0.37 0.52 -0.58 -0.02 -0.4 -0.21 0.06 0.16 -0.83
-0.98 -0.56 -1.95 0.12 -1.57 0.39 1.71 0.81 -0.55 -0.34 -1.85 0.17 0.82 0.4 -0.84 0.1 -0.18 -2.54 0.72 0.97 1.01 1.99 0.91 -0.04 -0.81 0.47 0.07 0.89 -1.46 -0.94 -0.13 -1.04 0.45 0.62 -0.51 -13.13 -1.58 -1.39 0.29 -29.27 0.84 -0.98 -1.49 -0.62 -1.54 -0.65 -3.21 -0.67
-0.47 - -1.17 - -2.9 1.41 4.01 -0.93 1.12 1.55 -0.47 - -3.41 -0.44 -0.65 -0.53 -1.1 0.16 -2.08 - - 1.59 -1.06 -0.28 -0.74 - - -1.99 -1.77 -1.79 -0.2 -0.24 - 0.13 - - - - - 0.58 -0.73 -0.73 0.61 -0.46 0.05 0.42 0.38 -1.22
- - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.91 -0.67 0.24 2.71 3.77 0.26 0.41 0.55 - -1.21 -2.12 -0.99 -1.3 -2.32 - -0.0 - - - 2.95 -0.7 1.63 - -1.21 - -0.56 -1.1 - - - - - - - - - - - -0.07 -1.53 -1.0 - - 0.54 0.14 -
-1.03 -1.8 -0.66 -1.03 -1.39 2.04 3.43 1.05 1.39 0.88 0.94 -2.89 0.57 -0.08 -0.75 -0.22 -1.18 -1.77 -3.43 -1.49 -2.78 1.77 0.77 1.96 -1.73 -2.13 -2.03 -3.5 -1.83 -0.19 -1.13 -0.23 -1.19 - - 0.51 - - -2.15 - -0.32 - -1.25 -1.48 -1.29 - -2.3 -1.19
- - 0.76 -1.23 - 2.12 3.4 1.84 2.12 0.56 1.0 - 0.69 -0.31 0.9 -2.33 -1.85 - -3.15 -2.68 -0.72 1.13 -2.18 1.73 - - -2.94 -0.15 - 1.23 - 0.93 - -0.58 -0.88 - - - - - -0.56 - 0.03 - - - - -
0.82 2.26 - - - 2.54 3.95 - - - - - - - - - - -0.09 - - - 4.01 - - - - - - - - - - - - - - - - - - - - - - - - 1.66 -
- -0.36 -0.7 -0.76 1.68 -2.13 - -1.75 0.64 1.91 0.55 0.17 -0.38 -1.71 -0.22 0.17 0.54 - -0.06 -20.95 0.39 3.49 1.4 - -0.21 -0.18 0.17 - 0.66 -0.74 - 1.44 - - - - - - 0.67 - 1.35 - - -0.78 - -1.0 - -0.39
- - - - - - 4.29 1.71 - 1.66 - - - 0.5 - - - - - - - 3.77 - - - - - - - - - - - - - - - - - - 2.8 - - - - - - -
- -2.02 -0.22 - - 1.03 4.27 0.96 1.18 0.69 - - -0.08 0.82 -0.23 - - -2.56 - - -1.23 2.94 -2.17 1.16 - - -1.93 -1.14 - -0.56 -1.95 -0.85 - - - - - - - - 1.05 - - -0.7 - -0.98 - -
-1.15 - 0.39 -0.54 -2.61 1.64 2.74 1.45 1.25 0.98 0.79 -3.73 0.67 0.29 0.46 -1.26 -1.25 -0.15 -2.39 -1.72 -0.07 0.06 0.06 1.35 -0.34 - -1.86 -0.63 -0.91 0.82 -2.08 -0.52 -0.8 0.04 - - - - -0.75 -1.01 2.07 -1.67 0.02 -4.03 -1.22 -1.9 -0.7 -2.41
-0.22 -1.31 0.05 -0.81 0.97 -1.02 1.34 -0.85 0.8 -1.58 -0.63 1.65 -1.02 -0.66 -2.31 -1.78 -0.5 0.5 -0.51 -0.25 -0.06 - -1.72 -0.39 0.09 1.55 -1.2 -0.71 -1.13 -2.12 -2.51 1.58 1.21 -0.12 2.16 -0.25 - 0.59 0.67 - 0.49 -1.6 -0.76 -2.84 -0.92 0.49 -1.43 0.15
- -1.48 - - -2.59 2.32 4.2 0.23 1.96 1.59 -8.7 -0.1 0.11 -1.45 -0.98 -0.85 -0.8 -2.06 -0.92 - - 2.31 - 1.03 - -0.68 -1.7 - - -0.38 -1.33 - - 0.61 - - - - - - - - -0.91 - - -4.21 - -
- -1.48 - - -2.59 2.32 4.2 0.23 1.96 1.59 -8.7 -0.1 0.11 -1.45 -0.98 -0.85 -0.8 -2.06 -0.92 - - 2.31 - 1.03 - -0.68 -1.7 - - -0.38 -1.33 - - 0.61 - - - - - - - - -0.91 - - -4.21 - -
- - - - - 1.68 3.25 1.94 1.69 2.12 -0.5 - 1.29 -1.23 -1.38 - - -2.79 - - - 2.83 - 2.34 - - - 0.04 - -0.38 - - - - - 1.48 - - - - 0.65 - -0.29 - - - -0.64 -
-1.17 -2.99 -0.32 -3.53 -2.93 1.49 3.25 1.16 1.3 0.45 0.66 -2.98 0.55 -0.39 -0.49 -0.78 -0.47 -2.22 -3.78 -4.92 -2.21 1.5 1.33 1.39 1.44 -2.19 -3.17 -2.26 -2.9 -0.14 -0.63 0.48 -3.23 -2.98 - -0.11 - - -1.6 - 0.05 -1.82 -2.53 -0.74 -0.17 -0.7 0.7 -0.91
- - 0.79 - - 1.2 4.3 -0.53 -0.71 2.0 -0.92 - -1.48 1.21 -0.43 -1.33 -1.46 - - -1.52 -1.72 2.52 -3.63 - - - -0.48 1.15 - 0.87 -2.12 - - 1.49 - - - - - - - - - - - - - -
- - - - - 1.2 2.45 - 1.75 1.72 - - -0.08 -0.35 - 0.12 - 0.37 - - - 2.97 - - - - - - - 1.12 - - - - - - - - - - 3.59 0.49 - - - 0.64 0.6 1.56
-2.46 -2.12 0.52 -1.85 -3.42 1.63 3.47 1.81 1.44 1.01 0.59 -1.76 0.19 0.29 0.47 -1.8 -2.21 -2.32 -3.47 -2.89 -1.04 1.7 -1.33 1.32 -1.52 -2.08 -2.34 -2.2 -3.51 0.65 -2.7 -0.02 - -2.05 -3.35 -3.18 -1.76 -2.34 -2.17 -0.93 0.89 -1.09 -1.79 -0.76 -0.95 -1.17 -1.21 -2.14
-1.09 - - - - -1.28 4.3 1.89 1.67 -0.3 - - -1.88 1.12 -2.86 - -1.81 - - - -0.77 2.67 - 0.92 - - - -0.38 - -1.86 - 2.22 - 1.19 - - - - - - - - - - - - - -
- - - - - - 2.87 - 2.7 - - - 1.88 - - - - - - - - 4.93 - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 1.34 4.34 1.55 2.23 0.6 - - -0.46 -0.95 - - - - - - -0.08 2.11 - 2.62 - - - - - - - 0.6 - - - - - - - - 0.91 - - - - - - -
- - -0.16 -1.1 - 0.86 2.87 1.5 1.92 -0.8 -1.88 0.88 0.59 -1.2 -0.43 -0.93 -1.47 -0.95 -1.83 -1.63 - 2.63 -2.13 0.2 -0.32 0.88 - -1.05 - 0.6 - 0.77 - 1.53 - 0.34 - 0.19 - - - - 0.33 -2.25 -0.02 0.08 - -0.34
- - - - 1.48 - 1.98 0.85 -0.25 - - - 0.02 0.89 0.82 -0.13 - 0.88 - - - 2.07 -0.53 1.8 - - - 1.51 0.14 0.08 - 2.36 1.83 - - - - - 0.87 - 1.1 1.24 0.18 - - 0.74 - -
- - -0.01 -1.22 -3.71 1.82 3.93 1.39 1.53 0.82 0.9 -3.82 -0.16 -0.09 0.29 -0.96 -0.08 -3.74 -2.6 -2.66 -3.48 1.19 -1.08 1.09 -2.43 -3.11 -1.88 -0.89 - 0.36 -2.88 0.07 - - - -0.77 -0.93 -1.93 -2.85 - 1.56 -4.05 -3.09 -2.7 -2.46 -3.98 - -4.05
-2.84 -2.44 0.2 -1.53 -1.73 1.84 3.46 1.14 1.36 0.77 0.32 -1.9 0.04 -0.3 0.21 -1.96 -1.91 -2.5 -1.97 -1.2 -1.09 1.06 -0.89 0.83 -0.79 -2.33 -1.51 -1.61 -1.96 0.3 -2.08 0.04 -4.05 -1.48 -0.52 -0.35 -2.09 -1.77 -1.96 0.65 1.38 -2.66 -0.0 -2.41 -1.12 -1.08 -1.54 -1.54
-1.18 -2.14 0.03 -0.97 -1.93 1.88 3.81 1.15 1.45 1.06 0.55 -1.54 0.08 0.32 0.27 0.24 -0.42 -4.48 -1.6 -0.46 -0.37 1.45 0.19 -0.6 - -1.75 -2.74 0.35 0.15 0.53 0.53 -1.37 - -0.56 - - - - - - - - -3.12 - -2.53 -4.63 - -
- - - - - 0.5 1.87 0.91 0.29 - - 1.58 -1.58 -2.08 -0.0 0.87 -1.61 - -0.84 - - 1.11 0.59 - - 1.58 - 0.5 - 1.66 - 0.19 - - - 2.35 2.58 1.2 - - 2.52 - - - - -0.94 -0.69 -
- - -1.69 -1.27 -3.19 1.34 4.13 0.8 0.21 1.1 0.15 - -0.63 -0.52 -0.49 - -1.51 -2.03 -2.66 - -0.62 2.43 -1.79 -0.45 -0.93 - - - - -0.72 -2.0 0.12 - 0.85 - - -0.4 -0.44 - - 0.98 -1.6 -0.81 -0.48 - -2.51 -0.94 0.01
- - 1.06 -0.82 - 1.88 3.18 1.66 1.9 0.55 0.92 -2.04 -0.02 -0.05 -0.03 -3.25 -1.92 -5.07 -4.09 -3.55 -1.34 2.27 -1.51 1.12 -0.08 -2.12 -3.78 -1.59 - 0.57 - -0.57 -1.85 -1.6 -1.9 - - - - -2.06 2.07 -2.47 -2.25 -3.33 -0.62 -1.94 -1.96 -2.42
0.41 -4.06 -0.45 -1.67 0.42 2.19 3.61 1.34 1.14 1.13 0.28 -2.56 -0.14 0.31 0.45 -2.87 -1.44 0.53 -4.09 -2.7 - 2.0 0.71 -0.88 -0.08 -2.56 -3.58 -4.16 -2.46 -0.28 -0.44 -0.9 - -0.61 - - - - -2.81 -2.06 -1.57 -2.48 -1.07 -3.09 -0.25 -2.0 -2.35 -1.69
-0.6 -2.55 -0.06 -3.38 -0.93 2.09 3.79 1.33 2.07 1.58 -0.09 - 0.36 0.3 0.32 -2.09 -2.02 -0.56 -3.25 - -2.53 1.04 0.2 1.32 -0.66 - -3.09 -3.44 -3.8 0.35 -1.65 0.3 - -1.87 - - -2.16 - -2.96 -2.33 -2.85 - -2.77 -4.35 -1.26 -3.24 -1.22 -3.28
-0.8 -2.1 -0.01 -3.54 -1.18 2.04 3.63 1.43 1.75 0.66 0.5 -1.08 0.93 0.35 0.25 -1.18 -1.09 -1.24 -2.08 -1.18 -1.51 1.14 0.41 0.46 -2.65 -0.76 -1.12 -1.73 -3.22 -0.02 -0.99 0.17 - -1.85 -2.15 -2.99 -2.14 - -1.47 -3.31 -0.24 -2.97 -0.13 -3.83 -2.85 -4.19 -2.85 -3.27
-1.21 - 0.98 -2.79 -1.17 1.91 3.74 1.35 1.83 1.28 0.99 - 0.39 -0.03 0.41 -2.15 - -1.22 -3.85 - -2.94 2.04 -1.88 1.62 - - -2.06 -3.53 - 0.13 - -0.25 -1.53 - - -1.41 - - - -1.74 0.56 -2.11 -3.67 -3.76 -3.79 -3.62 -3.65 -3.69
-1.23 -2.04 -0.47 -1.53 -0.3 1.57 3.39 1.22 1.37 0.79 0.52 -1.69 0.18 -0.33 0.06 -0.15 -0.32 -1.07 -2.13 -2.06 -2.91 0.93 0.16 0.79 0.19 -1.26 -1.81 -0.65 -2.21 0.33 -0.46 -0.41 -1.69 -2.02 -2.32 -2.15 -3.31 -3.31 -1.91 -1.89 1.26 -1.54 -0.13 -1.75 -1.11 -1.0 -0.51 -1.58
-1.43 -4.61 -0.41 -2.02 -1.03 1.53 3.39 1.13 1.31 0.65 0.39 -1.54 0.15 -0.26 -0.14 -0.92 -0.28 -1.28 -2.33 -2.09 -1.84 1.44 0.34 0.35 0.78 -1.37 -1.58 -1.64 -1.7 -0.03 -0.75 -0.51 -4.67 -1.26 -4.73 -4.56 -4.72 -4.71 -1.63 -1.18 -0.81 -0.69 0.27 -0.26 0.17 0.07 0.53 -0.47
- 0.04 - -10.27 2.4 - - - - - 0.68 2.96 -0.3 - -0.88 1.3 -1.87 - - - - 0.71 1.07 2.21 - 2.44 1.99 -1.17 - 1.86 -0.55 - - - - - - - - - 2.52 - - - - - - -
-2.46 - 0.66 - -0.57 1.9 3.9 1.64 2.19 2.05 0.77 - -0.47 0.89 -1.23 0.26 - -3.68 - -1.6 - 2.39 - - - - -0.63 -1.52 -1.28 - -1.48 -0.56 - - - - - - - - - - -1.67 - - - -1.62 -1.13
- - - - - 1.37 4.24 1.08 2.06 -0.8 - - -0.17 0.95 -0.69 - -1.8 - - - - 1.72 - 1.04 0.52 - - - -0.7 0.31 -0.8 0.02 - - - - - - 0.1 1.85 - - -0.59 -1.18 - - - -
- - -0.09 - - 0.55 3.82 2.12 -0.31 1.64 1.87 - 0.26 - 0.87 - -1.44 - -0.54 - 1.18 3.02 -0.58 - - -0.44 - - - 1.87 - - - - - - - - - - - - - - - - - -
- - - - - 2.95 3.92 1.37 - 2.78 - - 0.37 - -0.32 - - - - - - 3.42 - - - - - - - - - - - - - - - - - - - - 1.52 - - - - -
-2.61 -2.78 0.34 -1.91 -1.81 1.87 3.84 1.71 1.51 1.09 0.85 - -0.06 0.33 -0.29 -2.79 -3.33 -2.41 -2.82 - - 1.61 - 1.4 - - -2.3 -0.32 - -0.74 - 0.38 - -0.33 - - - - - - 1.87 -1.77 - - -1.81 -2.66 -2.68 -1.73
-2.25 -4.13 -0.41 -1.53 -1.87 2.03 3.71 1.39 1.8 0.78 0.69 -4.13 0.42 0.04 0.29 -1.15 -2.08 -1.49 -3.21 -4.19 -1.99 1.81 -0.45 1.25 -1.86 -3.75 -2.98 -2.15 -1.68 0.39 -2.05 0.29 -3.32 -1.48 -3.37 - - - - -3.52 0.87 -4.47 -1.29 -1.93 -1.58 -1.61 -2.06 -3.05
- - 0.2 -0.03 0.05 1.82 4.02 1.88 2.18 1.21 - - - -0.99 -1.54 -1.3 - - - - - 2.68 - 1.58 - - - - - -0.3 - 0.56 - - - - - - 0.65 - - - - - - - - -
- - - - - 0.84 4.61 -0.58 0.68 1.55 - - 0.86 1.25 0.32 - - - - -0.02 - 2.14 - 1.65 - - - - 0.07 - - 0.63 - - - - - - - - - - - - - - - -
-1.93 -0.64 -0.44 -0.04 -0.44 0.2 1.65 0.77 -0.41 -0.14 -0.87 1.34 0.17 0.6 -1.12 -0.14 0.6 0.03 -0.22 0.92 0.73 0.86 0.96 -0.53 - 1.58 -1.35 0.55 -0.21 0.45 0.66 -0.55 -0.51 0.74 0.44 - -0.55 1.04 - - 0.36 -2.74 -2.16 -0.8 - -1.6 - -2.66
0.74 0.15 -1.32 - -0.73 1.64 2.35 0.53 1.07 -0.92 - 1.17 0.91 0.15 -1.24 -0.96 -0.08 1.57 -1.98 -1.6 -1.5 2.45 -0.07 0.07 -0.45 1.17 0.77 -2.22 -1.66 -0.66 - -0.95 - 0.34 - - - - 0.72 - 0.96 - - -2.15 -0.98 -2.08 -1.03 -0.52
-1.19 -2.66 -0.55 -2.07 -2.84 1.43 3.06 1.55 1.72 0.37 0.24 -1.71 0.33 0.5 0.36 -1.78 -1.19 -2.58 -1.01 -0.79 0.0 1.31 -1.11 1.29 -1.34 -1.12 -1.24 -1.07 -1.49 0.52 -1.25 0.03 - 0.18 - -2.27 -1.43 -1.42 -0.76 -0.27 0.98 -0.87 0.06 -2.04 -1.74 -1.48 -0.97 -0.97
-2.46 - -0.33 -1.78 - 1.82 3.21 2.06 1.72 1.11 0.9 -2.44 0.4 0.09 1.1 -1.92 -0.27 -1.58 - - -0.4 2.4 -0.87 0.46 - - -1.53 -1.66 -2.2 1.32 -1.33 -0.55 - 0.74 - - - - - -0.72 - -2.74 -0.58 -2.75 -2.47 - -1.03 -
-1.88 -0.94 0.3 -1.39 -1.34 1.38 2.62 1.25 1.5 0.56 -0.02 -0.17 0.13 -0.43 0.28 -0.23 -0.39 -1.51 -1.52 -2.23 0.06 2.35 0.95 -0.38 0.42 -0.55 -0.82 -1.26 -1.06 1.1 -0.16 -0.34 - -0.52 -2.41 -2.24 - - -1.31 -1.56 -1.08 -1.96 -0.8 -2.31 -0.41 -2.48 0.42 -0.83
-1.15 - - -0.76 0.65 -1.35 2.76 -1.29 0.86 -0.8 1.11 - -1.94 -0.27 -0.63 -0.55 -1.59 -0.39 - - - 3.24 - 0.86 - - - - -0.87 -0.87 0.01 - - - - - - - - 3.64 - - -0.03 - -1.38 -1.29 0.85 -1.28
-2.44 -3.7 0.74 -0.34 -1.59 1.76 3.6 1.73 1.8 1.09 1.24 -1.41 0.42 -0.22 0.53 -1.76 -2.35 -1.57 -3.53 -2.43 -0.27 2.01 -2.26 1.39 - -1.41 -1.95 -2.36 - 1.16 -2.89 -0.73 - -1.25 -2.54 - - - - - -0.9 - -3.37 -3.22 -3.17 -3.58 - -
- -0.07 - - - 1.0 2.37 1.84 1.23 -0.05 - - -1.17 - - -0.33 0.84 -0.99 - -0.44 - 3.0 1.07 2.62 - -0.57 - - - -0.26 -0.14 - - 1.89 - - - - - - 2.5 - - -0.6 - - - -
-3.19 -3.32 0.16 -1.31 -2.38 1.88 3.62 1.86 2.21 1.46 1.21 -1.02 0.62 -0.06 0.52 -2.58 -2.04 -3.46 -3.67 -3.49 -1.09 2.08 -1.64 0.69 - -0.83 -2.72 -2.93 - 0.35 -3.47 0.16 - -1.36 - - - - - - 0.26 -3.83 - -3.84 - - - -
- - 0.7 - - 2.37 4.2 2.39 1.08 1.74 - - 0.13 -0.48 - - -1.06 - - 0.22 - 2.36 - - - - - 0.79 - - - - - - - - - - - - - - - -0.13 -0.15 - - -
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Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.