Heatmap: Cluster_45 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log₂ transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_10808 (10808)	-	-0.91	0.98	0.45	0.1	-0.03	1.71	-	-0.91	-2.18	0.1
Transcript_contig_1086 (1086)	-2.8	-1.53	2.48	0.83	-	-1.96	-1.12	-	0.07	-0.21	-0.98
Transcript_contig_11178 (11178)	-	-0.94	-0.51	-	-0.28	-1.3	-	-	-	2.65	1.19
Transcript_contig_11400 (11400)	-	-	-	-	-	1.52	-	-	-	1.47	2.43
Transcript_contig_11782 (11782)	-	-	-	-	1.65	-	1.77	-	-	2.16	-
Transcript_contig_1187 (1187)	-1.25	-	2.28	2.2	0.18	-	-	-	-	-	-
Transcript_contig_12432 (12432)	0.38	-	0.63	0.72	-	-	0.72	1.05	-	0.13	0.76
Transcript_contig_12838 (12838)	0.4	-0.84	1.51	0.03	-	0.31	1.03	-	-	0.67	-1.37
Transcript_contig_14533 (14533)	-	-	0.74	-	-	-	0.08	-	-	2.47	1.44
Transcript_contig_14751 (14751)	-0.55	-	-0.08	0.11	-	-0.73	1.28	-	-1.23	1.66	0.74
Transcript_contig_15123 (15123)	0.52	0.59	-	-	-	-1.1	-0.86	-	1.81	1.27	0.16
Transcript_contig_15811 (15811)	0.06	1.4	-	-	-	-	-	-	-	2.15	1.53
Transcript_contig_15898 (15898)	-0.23	-	-	-	-	-	-	-	-	2.87	1.51
Transcript_contig_16027 (16027)	-0.18	-2.35	1.7	1.06	-	-0.93	-2.06	-	0.82	0.52	-0.66
Transcript_contig_16463 (16463)	-	0.27	-	-	-	-	-	-	-	3.03	0.71
Transcript_contig_16644 (16644)	-	-	-	-	-	1.63	-	-	-	2.26	1.64
Transcript_contig_17371 (17371)	2.16	-	-	-	-	-	2.71	-	-	-	-
Transcript_contig_17540 (17540)	1.44	-	-	0.8	-	-	-	1.3	-	1.77	-0.59
Transcript_contig_17935 (17935)	-	-	-	-	-	-	-	-	-	2.89	1.85
Transcript_contig_18879 (18879)	-1.99	-0.51	-	-	-	0.54	-0.22	-	-	2.05	1.84
Transcript_contig_1889 (1889)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_19387 (19387)	-0.35	-0.42	0.31	-	-	-	-0.34	1.32	-	2.05	-0.32
Transcript_contig_20078 (20078)	-	-	-	-	-	-	-	-	-	2.48	2.44
Transcript_contig_20158 (20158)	-	-	-	-	-	-	-	-	-	2.89	1.85
Transcript_contig_21237 (21237)	-	-	-	-	-	-	3.46	-	-	-	-
Transcript_contig_21670 (21670)	2.02	0.57	-	-	-	-	-	-	-	2.45	-
Transcript_contig_2178 (2178)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_22572 (22572)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_22678 (22678)	-0.29	-	0.17	-	-	-1.47	-0.48	-	0.02	1.89	1.71
Transcript_contig_23262 (23262)	-0.58	-	-	-	-	-	1.44	-	-	1.95	1.91
Transcript_contig_24170 (24170)	-	1.85	-	-	-	0.53	-	-	-	2.16	0.54
Transcript_contig_25135 (25135)	-	-	-	-	-	-	-	-	-	2.48	2.44
Transcript_contig_2557 (2557)	-0.18	-	-1.2	-0.63	-	0.88	1.39	-	-	1.39	0.96
Transcript_contig_28870 (28870)	1.18	-	-	-	-	1.6	-	-	-	-	2.51
Transcript_contig_2915 (2915)	-	-	-	-	-	-	1.11	-	1.98	2.29	-
Transcript_contig_2956 (2956)	-1.46	-2.28	0.03	0.85	-	0.16	0.35	-0.54	-	1.07	1.28
Transcript_contig_30005 (30005)	-	-	-	0.45	-	-	1.56	-	-	2.43	0.39
Transcript_contig_3040 (3040)	-1.3	0.19	-	-1.06	-	-1.18	-1.73	0.72	-0.85	2.07	0.88
Transcript_contig_30879 (30879)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_31233 (31233)	-0.58	-	-	1.63	-0.73	-1.75	-0.13	-	-	1.79	0.97
Transcript_contig_3743 (3743)	-0.58	-0.35	-	-0.05	-	-	-	1.09	-	2.55	-0.8
Transcript_contig_38 (38)	-	1.66	-	-	-	-	-	-	-	2.97	-
Transcript_contig_40779 (40779)	-2.89	-1.54	-	-	-	-0.42	-	-	-0.68	2.29	2.09
Transcript_contig_42039 (42039)	-	-	-	-	-	-	-	-	-	2.48	2.44
Transcript_contig_42918 (42918)	0.49	-	0.64	-	-	-	-	-	-	1.57	2.34
Transcript_contig_4854 (4854)	-0.79	-	-	-1.37	1.84	-1.77	0.39	0.13	-	0.6	1.16
Transcript_contig_4856 (4856)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_4993 (4993)	-0.35	-	0.59	1.14	-0.51	-1.53	-0.07	-	-	1.64	0.46
Transcript_contig_55644 (55644)	-0.73	-0.3	0.21	-0.14	-	0.96	0.61	-0.78	-	1.26	0.12
Transcript_contig_560 (560)	-	-	-	-	-	0.37	0.82	-	-	2.42	1.38
Transcript_contig_5655 (5655)	0.25	2.28	-	-	-	1.71	-	-	-	0.75	-
Transcript_contig_5690 (5690)	-	-	-	-	-	0.09	0.23	-	-	2.47	1.69
Transcript_contig_5709 (5709)	0.45	-	1.65	1.12	-0.71	-	1.35	-	-	0.23	-
Transcript_contig_59032 (59032)	-4.63	-1.79	2.47	1.31	-	-2.23	-0.52	-	-2.41	-0.02	-0.81
Transcript_contig_59500 (59500)	0.33	-0.19	1.38	-	-	0.32	0.7	0.39	-	0.81	-1.5
Transcript_contig_60240 (60240)	-1.59	-0.26	0.57	0.34	-	-2.22	-1.97	-0.42	-1.99	1.58	1.39
Transcript_contig_60727 (60727)	0.79	0.7	-1.15	-0.42	-1.93	-0.02	-0.81	-1.14	-	1.39	0.64
Transcript_contig_60758 (60758)	0.06	-	0.85	-0.86	1.23	-0.53	1.09	-	-	0.01	0.51
Transcript_contig_60883 (60883)	-	-	-	-	-	-	1.21	-	-	3.12	-
Transcript_contig_61009 (61009)	-	0.34	-	-	-	1.18	-	-	1.51	1.8	0.19
Transcript_contig_61079 (61079)	-0.41	0.55	-	-	-	-	-0.57	-	-	2.82	0.05
Transcript_contig_6114 (6114)	1.45	-0.44	-	-	-	-	1.73	-	-	2.07	-
Transcript_contig_61162 (61162)	-1.87	-0.23	-	-	-	-1.45	1.35	1.93	-	1.08	0.04
Transcript_contig_62664 (62664)	-	-	-	-	-	-	-	-	-	2.74	2.11
Transcript_contig_62740 (62740)	-	-	-	-	-	-	-	-	-	3.31	0.1
Transcript_contig_6277 (6277)	-0.58	-2.44	1.47	-0.53	-1.0	-1.65	0.77	-1.43	-	1.51	-0.08
Transcript_contig_62779 (62779)	-0.49	-0.3	0.5	-0.85	-	-2.87	-1.67	-0.07	-	1.98	1.11
Transcript_contig_63091 (63091)	-	-	-	-	-	-	-	-	-	2.95	1.7
Transcript_contig_63123 (63123)	0.8	-	-	-	-	-	-	2.59	-	-	1.7
Transcript_contig_63299 (63299)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_63344 (63344)	-	-	-	-	-	-	-	-	-	2.89	1.85
Transcript_contig_63379 (63379)	0.59	-2.42	2.1	-0.07	-	-1.86	0.6	-0.06	-	0.41	-
Transcript_contig_63661 (63661)	-	-	0.27	-1.22	-	-1.62	1.52	-	0.71	1.01	1.34
Transcript_contig_63734 (63734)	-	0.65	-	-	-	0.29	-	-	-	2.82	0.2
Transcript_contig_63956 (63956)	-	-	1.59	-	1.81	-	-	-	-	0.75	1.49
Transcript_contig_64025 (64025)	-1.31	-	0.9	-	1.34	-	2.04	-	-	1.06	-
Transcript_contig_64060 (64060)	0.29	-	1.07	0.95	-	-	-	-	-	2.04	0.71
Transcript_contig_64436 (64436)	-	-	-	-0.12	0.12	-1.04	-1.54	-	-	2.27	1.74
Transcript_contig_64466 (64466)	-	-	-	1.07	-0.38	-1.39	0.26	-	-	2.02	1.32
Transcript_contig_6452 (6452)	-	3.46	-	-	-	-	-	-	-	-	-
Transcript_contig_64632 (64632)	-	-	-	-	-	-	-	-	-	3.18	0.93
Transcript_contig_64983 (64983)	-	-	-	-	-	-	-	-	-	3.46	-
Transcript_contig_65897 (65897)	-	-	-	-	-	-	1.93	-	-	2.59	0.23
Transcript_contig_65912 (65912)	-0.59	0.05	-0.81	-1.62	0.64	-	1.19	0.2	-	0.64	0.9
Transcript_contig_6598 (6598)	-	-	-	-	-	-	-	-	-	3.31	0.1
Transcript_contig_66248 (66248)	-	-	-0.17	1.0	0.06	-	1.3	-0.16	-	1.69	-1.05
Transcript_contig_66477 (66477)	0.22	0.99	0.64	0.74	-0.13	-0.2	-0.07	-	-	-0.2	0.01
Transcript_contig_66499 (66499)	-	-	-	-	-	-	-	-	-	2.82	1.97
Transcript_contig_66585 (66585)	-	-0.05	-	0.25	0.61	-	-0.27	-	-	2.34	0.5
Transcript_contig_66746 (66746)	-	3.46	-	-	-	-	-	-	-	-	-
Transcript_contig_67552 (67552)	-	-	-	-	-	-0.43	2.29	-	-	1.63	1.18
Transcript_contig_67787 (67787)	0.91	0.98	-0.4	-	-	-0.19	-	-	-	1.94	0.74
Transcript_contig_68065 (68065)	-0.5	-0.72	1.77	1.05	-1.43	-2.48	0.3	-0.46	-0.25	-2.67	-0.49
Transcript_contig_68270 (68270)	0.03	1.66	-	-	-	-	-	1.7	-	0.85	0.83
Transcript_contig_68344 (68344)	0.55	0.48	-	-	-	2.12	-	-	-	0.36	1.33
Transcript_contig_68418 (68418)	-	-	-	-	-	-	-	-	-	2.58	2.33
Transcript_contig_68575 (68575)	-0.7	-0.22	-	0.31	-	1.22	1.31	-	-	-0.76	1.53
Transcript_contig_68786 (68786)	-	-	-	-	-	-	-	-	-	2.58	2.33
Transcript_contig_69445 (69445)	-	-	-	-	-	-	-	-	-	2.74	2.11
Transcript_contig_69832 (69832)	-0.68	-1.96	1.03	0.1	-0.7	-0.65	1.49	-	-	0.57	0.54
Transcript_contig_71506 (71506)	-1.47	-2.01	-	-0.58	-0.05	-0.59	-	-	0.74	1.87	1.46
Transcript_contig_71894 (71894)	-0.98	-	0.22	-1.27	0.66	0.43	-0.21	-	-	0.96	1.66
Transcript_contig_72858 (72858)	-0.82	1.33	-	-	0.75	-	-	-	-	1.68	1.6
Transcript_contig_73444 (73444)	-2.51	-0.98	-	-	0.07	-1.22	-	-	-	2.45	1.76
Transcript_contig_73478 (73478)	0.25	-0.49	-	-0.46	0.79	-0.52	0.56	-0.22	0.79	0.33	-0.67
Transcript_contig_7355 (7355)	-	-	-	-	-	-	-	-	-	2.48	2.44
Transcript_contig_7463 (7463)	-0.87	1.15	-	-	-	0.49	-0.64	-	1.23	1.94	-
Transcript_contig_74910 (74910)	-	-	-	-	-	-	-1.23	-	-	2.8	1.84
Transcript_contig_7539 (7539)	-1.43	0.1	2.24	-	-	-0.88	1.27	0.92	-	-	-
Transcript_contig_7659 (7659)	0.28	-1.28	0.44	0.32	-	-	0.74	-	-	1.39	1.31
Transcript_contig_79905 (79905)	0.21	0.68	-0.27	-1.75	-3.04	-1.13	-1.86	-1.26	-	1.68	1.4
Transcript_contig_80796 (80796)	-1.11	-0.47	-	-1.63	-	0.77	-0.73	-0.14	-	2.4	-0.03
Transcript_contig_8184 (8184)	-	-	-	-	-	-	-	-	-	-	-
Transcript_contig_82757 (82757)	-1.33	-	0.82	-0.91	0.38	-1.17	0.92	-	-0.91	1.56	0.25
Transcript_contig_82852 (82852)	-0.11	-1.18	1.55	0.06	-0.22	-1.24	1.64	-	-	-	0.34
Transcript_contig_83038 (83038)	-	-	-0.53	1.18	-	0.05	-0.24	-	-	2.43	-0.41
Transcript_contig_83099 (83099)	-	-	-	-	-	-	-	-	-	2.48	2.44
Transcript_contig_83428 (83428)	1.14	1.35	-	1.04	-1.31	-	-	-0.53	-	-0.06	1.1
Transcript_contig_83600 (83600)	0.05	-	-	-	-	-0.06	-	-	1.27	1.99	1.39
Transcript_contig_84136 (84136)	-	-	-	-	-	-	-	-	1.89	2.01	1.71
Transcript_contig_84190 (84190)	0.63	0.32	-	-0.07	-	0.85	-	-	-	1.91	0.76
Transcript_contig_84535 (84535)	-0.37	-0.37	-	-	-	-	-	1.99	-	2.45	-
Transcript_contig_8783 (8783)	-0.02	-	-	-	-	-	1.32	-	-	2.5	0.88
Transcript_contig_90538 (90538)	-0.51	-1.59	1.0	0.88	-0.42	-0.64	1.06	-	-1.56	0.52	-0.18
Transcript_contig_90736 (90736)	-	-	-	-	-	-	-	-	-	2.89	1.84
Transcript_contig_91013 (91013)	-	-	-	-	-	-	-	-	-	2.16	2.71
Transcript_contig_91493 (91493)	0.31	-	-	0.7	1.74	-	-	-	-	2.26	-
Transcript_contig_91575 (91575)	-	-	-	-	-	-	-	-	-	3.05	1.43
Transcript_contig_9661 (9661)	-0.92	-1.49	0.59	-0.35	0.01	0.84	0.66	-1.79	0.1	0.68	-1.04
Transcript_contig_9737 (9737)	-0.85	-3.28	-0.94	-0.2	1.02	-2.83	1.34	0.08	-	0.8	0.53

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.