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Heatmap: Cluster_275 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
Cpa|evm.model.tig00020951.10 (tig00020567_g11520.t1)
 - - - 0.76 - 1.05 2.96 - 1.89 - 0.73 0.91 - - - - 2.0 1.69 - - - - - - - -
Cpa|evm.model.tig00020960.18 (tig00020960_g16538.t1)
 - - 0.06 0.35 -0.56 0.92 0.12 0.13 1.6 0.33 0.35 1.3 - 0.62 -0.7 -1.63 0.18 1.4 0.42 -1.99 - -2.0 0.53 -1.71 -0.22 -2.19

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.