Heatmap: Cluster_167 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_100 (100)	5.78	4.17	5.42	7.51	8.26	4.68	6.8	2.77	1.49	4.51	4.05
Transcript_contig_1050 (1050)	0.77	0.03	1.05	0.59	0.76	1.78	1.79	0.0	0.1	2.86	2.72
Transcript_contig_12182 (12182)	0.61	0.0	1.74	0.87	0.15	1.4	1.82	0.0	0.0	4.14	2.05
Transcript_contig_12435 (12435)	1.47	0.53	0.35	0.46	0.0	0.0	0.21	0.72	0.96	4.07	2.19
Transcript_contig_138 (138)	7.61	2.82	1.69	15.84	30.13	6.41	3.73	2.02	0.81	32.35	23.6
Transcript_contig_16934 (16934)	1.24	1.01	1.04	2.78	1.83	1.15	1.65	0.26	1.59	2.6	2.13
Transcript_contig_19305 (19305)	3.27	0.7	4.69	1.38	0.39	1.56	1.88	1.15	0.0	2.4	3.43
Transcript_contig_2876 (2876)	5.33	5.25	8.44	7.17	5.53	5.41	8.1	3.71	5.41	3.61	5.39
Transcript_contig_2888 (2888)	2.29	0.0	7.36	7.98	7.29	2.72	7.61	0.0	0.0	3.61	3.99
Transcript_contig_4104 (4104)	0.63	0.0	0.0	1.03	0.0	0.0	1.07	0.0	0.0	46.55	6.27
Transcript_contig_54510 (54510)	1.65	1.56	2.4	4.57	3.24	1.84	3.99	1.41	0.0	1.07	0.4
Transcript_contig_55456 (55456)	14.71	14.86	8.37	14.81	16.25	11.43	16.42	13.39	20.81	13.75	9.96
Transcript_contig_56814 (56814)	3.14	1.99	8.14	10.03	7.17	3.84	6.29	0.96	0.75	3.75	3.7
Transcript_contig_58351 (58351)	4.5	2.6	3.91	8.98	9.6	4.62	8.38	2.07	6.88	4.79	3.01
Transcript_contig_58477 (58477)	9.61	11.68	5.82	12.43	16.25	4.67	12.85	21.96	4.8	4.76	4.8
Transcript_contig_58912 (58912)	51.34	55.42	1.68	117.62	127.76	72.06	142.24	77.69	1.26	32.86	19.57
Transcript_contig_59139 (59139)	9.1	10.24	11.87	25.91	22.81	17.34	18.03	3.81	0.37	14.56	9.13
Transcript_contig_59162 (59162)	2.45	0.0	4.38	6.48	9.81	4.42	8.14	0.0	0.0	7.92	7.5
Transcript_contig_59213 (59213)	3.72	2.04	8.65	6.75	19.04	7.79	9.18	1.74	0.0	6.03	8.46
Transcript_contig_60547 (60547)	43.43	34.66	1.18	65.31	84.23	65.79	89.45	33.31	31.41	50.64	24.93
Transcript_contig_60559 (60559)	3.44	2.92	6.1	5.31	3.49	3.6	4.61	5.0	0.0	1.81	2.45
Transcript_contig_60715 (60715)	1.34	1.22	2.47	4.8	3.79	2.44	3.14	0.8	0.0	1.54	1.05
Transcript_contig_60771 (60771)	0.23	0.11	0.57	0.45	0.22	0.48	1.18	0.0	0.9	0.22	0.15
Transcript_contig_61954 (61954)	2.4	0.0	4.47	5.84	13.13	7.31	9.67	0.0	0.0	4.34	5.26
Transcript_contig_62864 (62864)	1.42	2.7	1.28	0.64	0.19	0.98	0.93	1.61	0.43	3.55	2.76
Transcript_contig_63615 (63615)	1.14	0.75	3.91	4.93	1.06	1.37	3.61	0.61	0.0	4.17	3.61
Transcript_contig_64535 (64535)	0.75	0.33	2.08	1.22	1.92	1.55	2.94	0.0	2.38	0.41	1.16
Transcript_contig_65585 (65585)	1.25	1.01	2.52	1.5	0.0	1.05	0.9	1.13	0.76	1.22	1.95
Transcript_contig_66269 (66269)	1.76	0.36	4.44	6.3	6.73	2.11	3.91	0.0	0.16	1.13	1.49
Transcript_contig_6700 (6700)	0.19	0.0	0.43	1.88	5.56	2.41	1.74	0.0	0.59	1.69	1.18
Transcript_contig_67818 (67818)	0.36	0.3	0.09	0.47	0.0	0.15	0.17	0.0	0.0	0.05	0.0
Transcript_contig_68068 (68068)	7.14	5.28	5.31	10.62	10.51	7.15	9.45	3.94	0.57	5.83	5.79
Transcript_contig_68208 (68208)	0.99	0.52	1.07	0.72	0.0	0.72	0.87	0.48	0.64	0.31	0.06
Transcript_contig_68253 (68253)	2.64	1.24	7.58	7.71	5.42	2.84	4.26	0.13	2.44	1.4	1.9
Transcript_contig_68701 (68701)	0.24	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.46
Transcript_contig_7020 (7020)	3.24	6.22	1.45	0.55	2.45	0.56	0.72	8.78	0.0	4.58	4.94
Transcript_contig_70618 (70618)	1.26	1.69	5.18	4.94	3.83	1.76	4.85	1.49	0.72	1.47	0.88
Transcript_contig_70893 (70893)	3.07	3.11	1.3	3.28	6.57	1.4	0.87	2.62	0.0	5.29	0.47
Transcript_contig_71883 (71883)	3.03	3.64	0.91	1.62	0.0	1.51	2.2	9.21	0.0	2.8	0.21
Transcript_contig_72909 (72909)	1.3	0.0	0.55	2.77	4.47	3.18	3.89	0.0	1.73	5.05	6.42
Transcript_contig_75822 (75822)	3.2	2.36	0.4	3.3	3.05	3.7	2.26	2.43	0.0	3.93	2.76
Transcript_contig_78909 (78909)	0.56	0.0	0.98	1.87	1.48	0.99	1.36	0.0	0.0	1.09	0.82
Transcript_contig_79602 (79602)	2.3	1.61	4.36	5.54	2.51	2.98	5.45	1.32	0.82	3.63	1.94
Transcript_contig_80378 (80378)	16.91	2.85	84.45	321.48	569.93	251.79	140.42	2.84	37.17	91.95	200.39
Transcript_contig_80458 (80458)	4.39	0.0	14.41	9.81	6.76	18.05	18.7	0.0	0.0	24.75	18.44
Transcript_contig_80476 (80476)	31.27	35.86	32.7	29.68	32.43	15.41	41.69	28.29	0.0	15.85	4.28
Transcript_contig_80539 (80539)	16.61	11.85	2.88	26.95	56.65	23.15	19.0	20.34	0.0	10.43	13.85
Transcript_contig_80802 (80802)	5.32	4.85	2.08	5.09	10.96	1.92	4.04	7.36	2.83	3.77	2.29
Transcript_contig_80846 (80846)	9.15	4.89	36.44	44.78	21.05	11.55	40.77	2.37	1.59	50.25	21.87
Transcript_contig_81219 (81219)	0.19	0.12	0.0	0.0	0.0	0.18	0.19	0.0	0.0	0.24	0.22
Transcript_contig_81650 (81650)	42.79	2.8	143.71	514.26	906.43	573.59	274.04	3.94	46.83	220.73	432.88
Transcript_contig_82302 (82302)	1.58	0.5	6.87	7.85	4.9	2.73	3.61	0.15	1.59	1.21	1.41
Transcript_contig_82513 (82513)	1.26	0.38	1.68	3.98	0.94	2.82	2.16	0.0	1.51	0.89	2.12
Transcript_contig_82727 (82727)	8.16	0.0	37.83	39.38	32.49	11.93	43.91	0.0	5.8	25.39	10.09
Transcript_contig_83049 (83049)	20.82	4.46	76.39	377.8	596.5	483.93	148.4	5.81	60.58	135.96	303.84
Transcript_contig_8874 (8874)	1.1	0.49	1.65	1.58	4.46	1.78	2.29	0.44	1.49	2.6	2.76
Transcript_contig_89418 (89418)	0.89	0.53	1.12	0.83	0.7	0.77	1.8	0.12	0.44	0.98	0.77
Transcript_contig_89798 (89798)	2.34	1.14	3.0	5.05	12.83	5.12	7.33	1.28	0.25	0.76	2.59
Transcript_contig_90106 (90106)	0.6	0.58	1.75	1.61	2.05	0.96	3.41	0.0	0.0	4.45	2.27
Transcript_contig_90118 (90118)	3.31	3.25	4.73	5.08	3.47	2.71	5.68	0.66	1.16	2.19	1.3
Transcript_contig_90495 (90495)	0.82	1.11	0.12	1.71	3.29	1.57	1.03	0.0	0.0	1.57	0.7
Transcript_contig_90512 (90512)	6.14	7.19	5.12	10.86	8.21	3.71	10.71	9.93	0.65	4.56	4.4
Transcript_contig_90535 (90535)	1.93	1.34	1.72	5.5	3.62	2.44	4.51	0.87	1.17	1.85	1.72
Transcript_contig_91163 (91163)	5.0	2.39	2.04	5.44	5.16	10.8	4.46	0.0	5.53	12.96	3.53

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)