Heatmap: Cluster_34 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

Gene	CCAP211/11P,High light	CCAP211/11P,Low light	CPCC90,BBM,72h,Autotrophy	CPCC90,BBM,97h,Mixotrophy	CPCC90,BBM,98h,Mixotrophy	CPCC90,BBM,120h,Mixotrophy	CPCC90,BBM,144h,Heterotrophy	NJ-7,20C	NJ-7,4C	UTEX259,20C	UTEX259,4C
Transcript_contig_11012 (11012)	0.0	0.0	0.0	0.0	0.0	2.49	0.0	0.0	0.0	5.02	0.0
Transcript_contig_11037 (11037)	0.0	0.0	0.0	0.0	0.0	1.37	0.0	0.0	0.0	0.0	2.77
Transcript_contig_11816 (11816)	0.0	0.0	0.0	0.0	0.0	6.93	0.0	0.0	0.0	4.93	0.0
Transcript_contig_13084 (13084)	0.0	0.0	0.0	0.0	0.0	11.0	0.0	0.0	0.0	13.68	19.97
Transcript_contig_13972 (13972)	0.0	0.53	0.0	0.0	0.0	3.81	0.0	0.0	1.2	0.99	0.48
Transcript_contig_1415 (1415)	459.11	560.54	34.26	98.3	83.29	1394.68	184.7	312.56	28.16	993.17	314.36
Transcript_contig_14365 (14365)	1.31	0.91	1.56	1.0	2.98	4.21	2.27	1.05	0.0	7.96	3.6
Transcript_contig_14600 (14600)	0.8	0.84	0.0	0.0	0.57	2.61	0.0	0.0	0.0	5.66	1.28
Transcript_contig_14700 (14700)	0.0	0.0	0.0	0.0	0.0	2.41	0.0	0.0	0.0	2.48	2.43
Transcript_contig_14753 (14753)	58.43	77.86	0.0	2.01	1.28	161.7	33.09	41.93	10.39	177.44	54.17
Transcript_contig_15242 (15242)	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	1.03	0.0
Transcript_contig_1541 (1541)	2.25	2.02	2.53	4.28	4.34	11.91	5.09	1.43	2.36	14.14	5.18
Transcript_contig_15864 (15864)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	3.28	4.47
Transcript_contig_16186 (16186)	3.33	1.86	2.1	2.23	2.23	69.33	0.51	1.15	2.59	20.8	6.62
Transcript_contig_16515 (16515)	1.04	0.0	0.0	0.0	0.0	551.13	0.0	0.0	0.0	176.82	133.65
Transcript_contig_16519 (16519)	0.0	0.5	0.0	0.0	0.0	2.22	1.09	0.0	0.0	2.29	0.89
Transcript_contig_16728 (16728)	0.52	0.28	2.51	3.0	4.84	11.99	1.58	0.58	0.49	17.17	12.05
Transcript_contig_17871 (17871)	0.0	0.0	0.0	0.0	0.0	1.85	0.0	0.0	0.0	0.0	1.87
Transcript_contig_18576 (18576)	0.0	0.0	0.0	0.0	0.0	4.73	0.0	0.0	0.0	0.0	1.59
Transcript_contig_1886 (1886)	46.96	44.98	2.47	2.75	2.25	3902.92	3.9	12.86	740.89	1504.96	473.55
Transcript_contig_21978 (21978)	0.0	0.0	0.0	0.0	0.0	2.99	0.0	0.0	0.0	3.1	1.01
Transcript_contig_23492 (23492)	15.6	0.0	0.0	2.1	8.65	4963.53	14.19	0.0	20.02	663.61	296.77
Transcript_contig_24546 (24546)	0.0	0.0	0.0	0.0	0.0	1.36	0.0	0.0	0.0	0.7	0.68
Transcript_contig_25162 (25162)	0.0	0.7	0.0	0.0	0.0	1.88	0.37	0.0	0.0	1.62	0.55
Transcript_contig_2997 (2997)	27.23	29.96	10.52	24.96	37.4	314.28	15.69	23.03	65.69	333.58	203.39
Transcript_contig_30459 (30459)	0.0	0.0	2.88	4.2	0.0	11.82	1.83	0.0	3.91	8.67	3.92
Transcript_contig_3068 (3068)	0.28	0.57	0.0	1.74	0.0	2.05	0.0	0.0	0.0	1.05	0.0
Transcript_contig_3184 (3184)	15.33	12.89	4.21	3.69	4.57	126.57	10.78	10.51	20.26	41.33	22.46
Transcript_contig_3346 (3346)	0.62	0.36	0.37	0.24	0.22	2.61	0.78	0.38	3.79	5.01	2.62
Transcript_contig_3482 (3482)	0.65	0.38	0.0	0.47	0.0	2.77	0.3	0.0	0.0	6.02	7.26
Transcript_contig_3854 (3854)	0.0	0.0	0.0	0.0	0.0	2.11	0.0	0.0	0.0	1.1	2.13
Transcript_contig_4001 (4001)	0.0	0.0	0.0	0.0	0.0	6.39	0.0	0.0	0.0	0.0	4.3
Transcript_contig_4166 (4166)	0.0	0.0	0.0	1.52	0.0	8.64	3.4	5.39	3.62	13.26	7.26
Transcript_contig_43057 (43057)	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	1.01
Transcript_contig_4808 (4808)	3.18	2.71	1.35	0.99	0.35	14.48	1.93	3.03	0.0	6.7	3.65
Transcript_contig_4862 (4862)	7.19	9.52	2.51	9.64	9.33	37.86	9.35	8.26	0.63	23.31	15.53
Transcript_contig_4975 (4975)	0.49	0.53	0.0	0.21	0.0	1.72	1.05	0.0	0.0	3.06	1.1
Transcript_contig_4981 (4981)	0.0	0.0	0.0	0.0	0.0	2.34	0.0	0.0	0.0	9.65	0.0
Transcript_contig_5149 (5149)	5.44	2.86	5.8	5.52	2.26	86.94	7.7	0.27	51.92	54.34	11.07
Transcript_contig_54249 (54249)	18.98	28.04	4.89	1.55	3.81	280.36	4.95	23.15	0.66	56.58	39.4
Transcript_contig_54260 (54260)	9.68	10.91	2.24	5.33	5.65	28.33	7.45	10.69	1.26	22.26	7.62
Transcript_contig_55798 (55798)	0.26	0.0	3.15	1.15	1.47	4.74	0.44	0.0	0.85	1.54	4.66
Transcript_contig_55829 (55829)	69.8	92.71	31.97	102.4	81.8	692.45	112.06	77.61	61.53	241.09	70.35
Transcript_contig_57595 (57595)	5.3	7.02	6.73	11.78	13.33	40.41	13.36	7.88	1.52	22.38	9.15
Transcript_contig_57972 (57972)	1.42	1.28	0.54	1.0	0.55	5.27	0.96	0.36	4.11	4.79	2.25
Transcript_contig_58149 (58149)	6.21	8.29	2.63	6.96	8.34	19.14	6.97	7.4	3.0	15.03	9.15
Transcript_contig_58695 (58695)	117.61	182.27	0.3	0.21	0.2	1607.1	1.84	167.2	423.81	3537.35	926.33
Transcript_contig_59288 (59288)	23.97	34.83	7.29	14.31	19.87	65.54	12.49	25.71	7.82	53.56	24.84
Transcript_contig_6010 (6010)	0.0	0.0	0.0	0.0	0.0	0.48	0.0	0.0	0.0	0.99	0.0
Transcript_contig_6020 (6020)	0.0	0.0	0.0	0.0	0.0	1.58	0.0	0.0	0.0	1.62	0.0
Transcript_contig_60404 (60404)	53.02	51.42	42.04	76.37	63.44	253.26	28.3	22.56	12.48	526.0	351.57
Transcript_contig_60503 (60503)	8.3	13.32	6.21	16.04	10.51	48.03	11.46	16.31	21.57	34.3	16.36
Transcript_contig_60540 (60540)	10.86	28.26	0.0	0.0	0.84	35.76	1.89	17.25	2.9	41.29	3.95
Transcript_contig_60851 (60851)	0.0	0.0	1.96	0.0	0.0	0.0	0.0	0.0	0.0	3.29	0.0
Transcript_contig_61275 (61275)	0.0	0.0	0.0	0.0	0.0	11.7	0.0	0.0	0.0	0.0	2.36
Transcript_contig_61567 (61567)	0.0	0.0	0.0	0.0	0.0	1.06	0.0	0.0	0.0	1.1	0.0
Transcript_contig_61867 (61867)	0.0	0.0	34.36	25.62	36.07	245.63	25.15	0.0	4.65	456.89	239.27
Transcript_contig_61963 (61963)	0.27	0.0	0.63	1.46	1.47	2457.96	0.74	0.63	0.0	1396.86	714.36
Transcript_contig_62400 (62400)	0.0	0.0	0.0	0.0	0.0	5.93	0.0	0.0	0.0	3.05	11.96
Transcript_contig_62627 (62627)	1.23	1.38	0.0	0.0	0.63	13.33	0.0	0.0	0.0	6.02	10.07
Transcript_contig_6268 (6268)	6.96	11.58	5.89	16.66	14.53	89.62	14.87	11.86	2.66	165.04	119.05
Transcript_contig_62963 (62963)	6.7	0.37	11.73	15.83	11.55	1223.51	27.45	0.0	0.0	1391.77	261.05
Transcript_contig_63007 (63007)	0.0	0.0	1.76	0.0	0.0	0.95	0.0	0.0	0.0	2.96	0.0
Transcript_contig_64082 (64082)	1.74	0.91	1.73	1.05	1.68	20.81	0.0	0.0	0.0	13.97	6.52
Transcript_contig_64270 (64270)	0.0	0.0	0.0	0.0	0.0	0.59	0.65	0.0	1.48	0.0	1.19
Transcript_contig_64928 (64928)	0.0	0.0	0.0	0.0	0.0	3.03	0.0	0.0	0.0	0.0	9.18
Transcript_contig_66253 (66253)	3.57	4.09	15.25	5.0	0.76	63.5	4.17	0.39	22.0	16.16	22.5
Transcript_contig_66509 (66509)	0.0	0.0	0.0	0.0	0.0	1.64	0.0	0.0	0.0	5.07	0.0
Transcript_contig_66560 (66560)	0.0	0.0	0.0	0.0	0.0	0.68	0.0	0.0	0.0	0.0	3.42
Transcript_contig_67655 (67655)	3.84	8.17	16.77	8.29	7.95	322.07	15.84	18.65	155.14	205.69	90.13
Transcript_contig_68133 (68133)	0.0	0.0	0.0	1.8	0.0	4.23	0.0	0.0	0.0	3.26	0.0
Transcript_contig_68276 (68276)	0.0	0.0	0.0	0.0	0.0	64.2	0.0	0.0	5.32	46.97	26.66
Transcript_contig_6834 (6834)	0.0	0.0	0.0	0.0	0.0	2.2	0.0	0.0	0.0	1.13	0.0
Transcript_contig_68403 (68403)	0.93	0.87	0.67	0.28	1.04	73.38	0.12	0.34	0.23	170.88	111.11
Transcript_contig_68480 (68480)	3.1	4.08	3.27	1.5	1.92	2727.58	1.04	9.91	0.0	4378.16	2470.25
Transcript_contig_68558 (68558)	0.52	0.16	0.82	0.53	1.6	89.88	0.85	0.0	0.56	180.67	95.81
Transcript_contig_6856 (6856)	9.88	31.17	0.0	0.0	0.0	16.29	0.8	27.92	32.44	32.46	10.67
Transcript_contig_68635 (68635)	0.0	0.0	0.0	0.0	0.0	19.62	0.0	0.0	0.0	13.5	0.73
Transcript_contig_69983 (69983)	108.22	174.17	1.49	2.44	4.35	2636.55	31.52	165.74	66.59	3450.71	1054.08
Transcript_contig_70850 (70850)	0.26	0.0	0.0	0.0	0.0	0.48	0.0	0.0	0.0	1.47	0.48
Transcript_contig_70866 (70866)	0.19	0.19	0.0	0.55	0.0	1.3	0.0	0.0	0.0	1.08	2.37
Transcript_contig_71130 (71130)	150.6	0.0	196.0	325.5	416.28	2315.56	611.08	0.0	125.57	5381.0	2974.14
Transcript_contig_71501 (71501)	3.84	5.06	2.19	6.67	20.03	67.0	11.57	4.41	0.0	13.26	4.6
Transcript_contig_72221 (72221)	0.0	0.0	0.0	0.0	0.0	2.06	0.0	0.0	0.0	0.42	0.0
Transcript_contig_736 (736)	75.28	76.33	10.06	4.75	1.76	511.29	9.68	20.51	345.02	386.56	184.84
Transcript_contig_739 (739)	18.64	37.23	11.77	6.15	0.0	89.6	6.85	19.76	0.0	67.67	37.91
Transcript_contig_74471 (74471)	0.57	0.57	0.0	0.0	0.0	6.27	1.7	0.0	0.0	2.4	7.05
Transcript_contig_778 (778)	32.37	27.11	46.64	114.12	113.36	857.4	43.43	23.84	131.76	603.25	208.09
Transcript_contig_78722 (78722)	132.11	138.5	2.04	170.92	120.65	3095.42	147.35	110.22	53.84	4486.47	2012.39
Transcript_contig_79018 (79018)	24.58	16.84	1.42	1.59	0.52	157.47	4.85	6.01	35.06	145.81	60.75
Transcript_contig_79035 (79035)	3.44	4.91	4.63	6.63	5.46	41.18	8.64	4.7	3.29	27.33	13.27
Transcript_contig_79157 (79157)	393.45	560.71	59.93	68.44	99.26	1073.25	122.8	604.1	164.63	1427.08	639.77
Transcript_contig_79854 (79854)	1.27	0.0	0.0	0.0	0.0	910.45	0.0	0.0	0.0	1013.07	998.24
Transcript_contig_79896 (79896)	0.0	0.0	0.0	4.35	0.0	24.65	5.4	0.0	0.0	28.91	16.58
Transcript_contig_79910 (79910)	0.0	0.0	0.0	0.0	0.0	42.13	0.0	0.0	5.89	21.79	0.0
Transcript_contig_80019 (80019)	0.0	0.0	0.0	0.0	0.0	113.0	0.0	0.0	17.22	302.49	138.15
Transcript_contig_80519 (80519)	13.36	0.3	1.56	0.36	0.0	318.32	35.68	0.95	145.14	65.01	36.62
Transcript_contig_80726 (80726)	2.04	2.06	0.0	0.0	0.0	27.05	0.8	0.0	0.0	50.17	17.59
Transcript_contig_80906 (80906)	0.21	0.0	0.0	0.0	0.0	0.35	0.0	0.0	0.0	0.17	0.53
Transcript_contig_80967 (80967)	0.0	0.0	0.0	0.0	0.0	11.52	0.0	0.0	0.0	23.84	13.56
Transcript_contig_81186 (81186)	1.19	0.0	0.0	0.0	0.0	59.41	0.0	0.0	5.53	106.59	28.85
Transcript_contig_81664 (81664)	0.0	0.0	0.0	0.0	0.0	10.29	1.17	0.0	0.0	8.43	1.9
Transcript_contig_81690 (81690)	0.53	0.21	1.56	0.89	3.96	6.93	2.03	0.0	0.85	1.81	1.23
Transcript_contig_82009 (82009)	0.77	0.0	1.93	2.13	1.13	53.77	0.36	0.0	0.0	61.37	58.61
Transcript_contig_82037 (82037)	17.18	25.37	9.72	1.38	0.0	824.41	16.71	24.46	3.29	152.5	111.99
Transcript_contig_82368 (82368)	21.64	21.81	2.88	32.72	31.43	211.18	30.51	17.43	0.0	114.77	37.11
Transcript_contig_82621 (82621)	65.39	110.1	1.26	36.65	69.69	289.13	12.9	96.46	5.12	456.21	268.71
Transcript_contig_82846 (82846)	12.09	15.37	10.77	13.52	9.72	119.92	11.2	13.14	10.37	38.57	14.55
Transcript_contig_83008 (83008)	0.0	1.3	0.0	0.0	0.0	5.64	0.0	0.0	0.0	2.91	0.0
Transcript_contig_83279 (83279)	1.44	0.0	0.0	2.49	5.22	683.6	4.45	1.17	0.0	1245.78	631.29
Transcript_contig_83493 (83493)	0.0	0.57	0.0	2.03	0.0	201.57	1.21	1.91	0.0	213.88	215.18
Transcript_contig_84165 (84165)	3.32	3.4	5.71	12.59	14.45	1978.86	8.34	2.88	0.0	3167.58	1398.9
Transcript_contig_84440 (84440)	0.0	0.0	0.0	0.0	0.0	0.63	0.0	0.0	0.0	2.61	0.64
Transcript_contig_84832 (84832)	0.0	0.0	0.0	0.0	0.0	0.44	0.0	0.0	0.56	0.0	0.22
Transcript_contig_8633 (8633)	4.22	8.76	0.0	0.35	0.0	6.71	0.0	3.76	0.0	9.54	3.04
Transcript_contig_89582 (89582)	18.44	20.0	10.61	11.1	8.18	936.35	3.01	6.0	146.64	1039.45	210.83
Transcript_contig_90236 (90236)	0.0	0.0	0.0	0.0	0.0	7.44	0.0	0.0	0.0	0.0	5.0
Transcript_contig_90377 (90377)	78.68	3.57	34.79	649.78	650.71	1835.1	346.81	0.0	188.68	1679.19	858.36
Transcript_contig_90544 (90544)	4.43	3.53	2.47	3.33	4.31	199.53	3.73	0.0	0.0	47.54	21.99
Transcript_contig_90669 (90669)	7.21	7.45	10.99	19.89	14.4	3418.53	12.59	8.09	5.16	8036.57	5498.94
Transcript_contig_90869 (90869)	3.78	9.8	6.3	7.86	10.94	31.14	9.39	4.88	2.62	25.3	11.29
Transcript_contig_91008 (91008)	0.37	0.0	2.52	1.8	1.48	291.17	5.2	0.0	10.25	435.33	192.92
Transcript_contig_91009 (91009)	2.98	6.63	1.3	2.25	5.18	13.47	2.71	6.31	0.0	22.51	12.98
Transcript_contig_9101 (9101)	2.88	1.57	4.93	4.73	0.0	56.03	2.06	0.0	0.56	46.75	18.74
Transcript_contig_91272 (91272)	1.04	0.0	0.0	0.0	0.0	1.92	0.0	0.0	0.0	1.99	0.0
Transcript_contig_91491 (91491)	128.74	207.95	0.36	4.56	2.35	1250.07	42.13	187.02	182.68	2847.17	926.01
Transcript_contig_9545 (9545)	0.13	0.0	0.0	0.49	0.0	0.47	0.55	0.0	0.0	0.96	1.78
Transcript_contig_9910 (9910)	0.0	0.0	0.0	0.0	0.0	5.34	0.0	0.0	0.0	11.01	1.8

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)